Assembling Illumina and 454 data
This is a question that keeps cropping up on Seqanswers and Biostar. Amazingly there is still no 100% satisfactory pipeline for assembling combined Illumina and 454 data de novo. Here are the ways I know about: 1) Assemble 454 data on its own and correct with Illumina data For example, Newbler for the 454 data. [...]